Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCTAATCTATCAGCTGCAC
.((((((((.(((((...((.&)).)))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261838
GeneSymbolPTER
Binding site951,971
Score0.846
Seed1
Au0.632
Energy-16.8
Binding len20
Me-5.269
Phylopstem1.1693930874999998
Phylopflank0.7557764212500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure