Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAATGCTGCCACAAGCTGCAT
.((((((((.(((.((((((.&)))..))).))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261844
GeneSymbolTESPA1
Binding site1727,1750
Score0.846
Seed1
Au0.544
Energy-20.5
Binding len23
Me-5.893
Phylopstem0.31055831111111115
Phylopflank-0.1024633
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure