Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATGCACAGGG
.(((((((((((..........&))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001265
GeneSymbolCDX2
Binding site1850,1863
Score0.846
Seed1
Au0.441
Energy-17.0
Binding len13
Me-6.908
Phylopstem0.13375601666666662
Phylopflank0.0035568249999999996
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end0
Position3UTR
2D Structure