Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGGGAGTTTGTGTTGTTGTTGCTGCTGTTTGGGTTG
.(((((.((((((((((((((&)))))))))...................)))))..))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001265
GeneSymbolCDX2
Binding site2040,2081
Score1.0
Seed0
Au0.515
Energy-26.6
Binding len41
Me-5.337
Phylopstem0.2032536666666666
Phylopflank0.0949350175
Longest consecutive pairings9
Position of longest consecutive pairings32
Pairings in 3prime end8
Position3UTR
2D Structure