Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGACTACGGCGGTTACCACGTGGCGGCCGCAGCTGCAGC
((((((((((((((((.(.((&.)).).)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001265
GeneSymbolCDX2
Binding site418,461
Score1.0
Seed1
Au0.294
Energy-31.3
Binding len23
Me-3.938
Phylopstem-0.44260465625
Phylopflank-0.3621133999999999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure