Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCCACCGCCAGCAGCTGCT
..(((((((((((.((..((.&))..)).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001265582
GeneSymbolURM1
Binding site2638,2658
Score0.846
Seed1
Au0.294
Energy-23.1
Binding len20
Me-5.814
Phylopstem2.09050925
Phylopflank1.61042968375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure