Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTCACCATCACCGCCACCACCGTGCAGCTGCC
..(((((((((((.((..(((&.)))...)).)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001265587
GeneSymbolINSL3
Binding site396,432
Score1.0
Seed1
Au0.353
Energy-22.1
Binding len24
Me-5.814
Phylopstem0.5455403076923079
Phylopflank0.6051068350000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure