Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGGCAGCTGCAAA
((((((((((.((........&)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001265590
GeneSymbolRTN3
Binding site4102,4116
Score0.962
Seed1
Au0.574
Energy-21.0
Binding len14
Me-8.588
Phylopstem0.1991522
Phylopflank-0.09251531299999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure