Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTTCAGCAACATCCCGGAGATCGCGCAGCTGCAC
.((((((((((((((..((((&))))...))))................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001265593
GeneSymbolPLEKHG5
Binding site1377,1415
Score0.846
Seed1
Au0.324
Energy-24.5
Binding len38
Me-4.026
Phylopstem-0.2587282
Phylopflank0.008795354999999977
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure