Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTACATCCGCTACTGCAT
.(((((..((((.((((.(((&))).)))).))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001265594
GeneSymbolPLEKHG5
Binding site1521,1542
Score0.846
Seed0
Au0.412
Energy-23.6
Binding len21
Me-8.94
Phylopstem3.3646944000000003
Phylopflank2.0154797875
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure