Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTCAGCTGCAGCA
.....(((((((((((((((.&))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001265595
GeneSymbolPFDN6
Binding site430,448
Score0.923
Seed0
Au0.368
Energy-22.1
Binding len18
Me-13.666
Phylopstem2.6702406705882353
Phylopflank2.6155591625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure