Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGGCTGCAGCTCCTCAAGCAC
.(((((((((((((((.....&))))))))))))......))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001265601
GeneSymbolRPP38
Binding site422,444
Score0.923
Seed1
Au0.441
Energy-17.6
Binding len22
Me-3.793
Phylopstem-0.47676253809523805
Phylopflank-0.6556463612500001
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end3
Position5UTR
2D Structure