Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAAGAAGCAAGTAATAAAGATGCTGAAGCTCTGGCAGCTGCAC
.(((((((((.(..((..(((&.)))...))..).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001265602
GeneSymbolSMC2
Binding site1337,1384
Score0.923
Seed1
Au0.5
Energy-20.6
Binding len23
Me-8.764
Phylopstem4.298195100000001
Phylopflank3.191606162375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure