Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCTGCAACCACAGCTT
....(((((.(((((((((((&)))).))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001265602
GeneSymbolSMC2
Binding site1857,1876
Score0.923
Seed0
Au0.559
Energy-19.6
Binding len19
Me-10.789
Phylopstem2.6193615000000006
Phylopflank3.26667808125
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure