Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGTTTTGGTGTCGGGG
.((((((((....((((((...&))))))......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001265610
GeneSymbolTRAK1
Binding site2219,2240
Score0.923
Seed1
Au0.603
Energy-18.7
Binding len21
Me-12.497
Phylopstem-0.0975964
Phylopflank-0.6054781012500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure