Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCCACATTGTGTGTG
.....(((((((((((.((((.&)))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001265610
GeneSymbolTRAK1
Binding site3209,3226
Score0.846
Seed0
Au0.662
Energy-17.0
Binding len17
Me-13.666
Phylopstem1.1297872763636363
Phylopflank1.6543439472115384
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure