Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGACAGTGCCTGCTCTGTGGATTACAGCAGCAGCTGCC
..((((((((.((((((((((&.))))...........)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001265611
GeneSymbolMAPKBP1
Binding site3198,3240
Score0.923
Seed1
Au0.397
Energy-25.1
Binding len32
Me-7.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure