Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGGATGGCCGGGC
.((((((......((((((...&)))))).....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001265612
GeneSymbolCNOT1
Binding site5339,5357
Score0.846
Seed1
Au0.456
Energy-18.6
Binding len18
Me-15.867
Phylopstem5.021020333333333
Phylopflank5.9199065625
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure