Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATTCAGCAGCAGCTGG
...(((((((.((((...(((&)))...)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001265612
GeneSymbolCNOT1
Binding site5845,5864
Score0.846
Seed0
Au0.471
Energy-20.8
Binding len19
Me-9.572
Phylopstem4.901493
Phylopflank4.853683200000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure