Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATTCGTGTGCAGCGAGTGCGGCCGCAGCTTCAGC
(((.(((((((((((((....&.))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267033
GeneSymbolMZF1
Binding site1222,1259
Score0.846
Seed0
Au0.309
Energy-24.4
Binding len19
Me-6.97
Phylopstem0.4192681692307692
Phylopflank0.2751755900000001
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure