Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCCGTGTGCCAGA
..(((((((((...(((((...&))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001267040
GeneSymbolJARID2
Binding site4295,4311
Score0.923
Seed1
Au0.412
Energy-20.8
Binding len16
Me-10.45
Phylopstem2.7160091222222222
Phylopflank2.31168240625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure