Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCGCAACCGGAGTCCGTGCAC
.(((((((.(((((((.((((&)))).))))))).)))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267040
GeneSymbolJARID2
Binding site1643,1667
Score1.0
Seed1
Au0.412
Energy-24.1
Binding len24
Me-4.85
Phylopstem3.459906142857143
Phylopflank3.1522933524999996
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure