Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAATGGGATGCTGAAAAGCAACCAGCAGCTGG
...(((((((((((((.....&.)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267045
GeneSymbolPSME3
Binding site873,908
Score1.0
Seed0
Au0.529
Energy-22.6
Binding len16
Me-6.515
Phylopstem5.8123895
Phylopflank4.995249375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure