Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCGCTGTGTTTGGGAGGACTCGAACTGGCGCCAGG
..((((((((((((..((((((&)))))).........)))))))...........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330678
GeneSymbolNMRK1
Binding site110,149
Score0.846
Seed1
Au0.5
Energy-20.8
Binding len39
Me-5.925
Phylopstem-0.170921247826087
Phylopflank0.18588941875
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end6
Position5UTR
2D Structure