Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGCC
..(((((.((((((((.....&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267545
GeneSymbolARFRP1
Binding site692,733
Score0.846
Seed0
Au0.265
Energy-23.4
Binding len15
Me-7.271
Phylopstem-1.4463363375
Phylopflank-1.48845321375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure