Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACAAGTGCAAAATACAGACTTGTGTGCCAT
...(((((((((((((((((..&)))))))................)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001267550
GeneSymbolTTN
Binding site19787,19821
Score0.846
Seed0
Au0.632
Energy-19.1
Binding len34
Me-6.515
Phylopstem4.2709284606060605
Phylopflank4.342742937499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure