Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGTCTACAATAGCAGTTGCT
..((((((((.((((((((((&))))....)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267550
GeneSymbolTTN
Binding site2187,2211
Score1.0
Seed1
Au0.588
Energy-22.8
Binding len24
Me-7.782
Phylopstem2.2801464285714284
Phylopflank2.5655010475
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure