Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTTGCAACTGTAATAGTAGCTGTAT
.(((((((((((((((((((.&))))))))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267557
GeneSymbolPDCD6
Binding site608,634
Score0.923
Seed1
Au0.632
Energy-20.9
Binding len26
Me-3.793
Phylopstem1.0541284759999998
Phylopflank0.18421831749999998
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure