Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTTGCAACTGTAATAGTAGCTGTAT
.(((((((((((((((((((.&))))))))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267559
GeneSymbolPDCD6
Binding site543,569
Score0.846
Seed1
Au0.632
Energy-20.9
Binding len26
Me-3.793
Phylopstem-0.19030954799999997
Phylopflank0.75458585125
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure