Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCGCTGACCTCAGCTGCGAC
(((((((((.((((((..(((&)))..)).)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267561
GeneSymbolTJP3
Binding site2560,2583
Score0.923
Seed1
Au0.338
Energy-22.0
Binding len23
Me-5.18
Phylopstem3.7492918555555557
Phylopflank2.555847696249999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure