Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTCGACTGGGCGGCAGCAGG
((((.((((((((((..((((&))))..)))))..))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363686
GeneSymbolHBS1L
Binding site1893,1917
Score0.923
Seed0
Au0.471
Energy-22.4
Binding len24
Me-8.29
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure