Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACCCCCGCAGTTGCC
..((((((((((..(((....&)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267580
GeneSymbolPRC1
Binding site2464,2480
Score1.0
Seed1
Au0.485
Energy-20.7
Binding len16
Me-7.103
Phylopstem3.26011594
Phylopflank2.683335763625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure