Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCTACGGCAGCTGGAAA
((.(((((((.((.((((...&)))).)).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267580
GeneSymbolPRC1
Binding site655,674
Score0.846
Seed0
Au0.603
Energy-20.8
Binding len19
Me-9.177
Phylopstem0.46383528571428567
Phylopflank0.42570790775
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure