Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGCTTCAAAACCAGAGATTGCAGGAGCGGG
((((..(((((((((((((((&)))))))))))...............))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267594
GeneSymbolSENP1
Binding site1194,1231
Score0.923
Seed0
Au0.559
Energy-22.6
Binding len37
Me-9.958
Phylopstem0.7600983633333335
Phylopflank0.8008901625000001
Longest consecutive pairings11
Position of longest consecutive pairings26
Pairings in 3prime end8
PositionCDS
2D Structure