Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCTGGGGCCCCGCACTGCAT
.(((((.(((((..(((((((&)))))))........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267718
GeneSymbolIL11
Binding site1190,1216
Score0.846
Seed0
Au0.441
Energy-21.8
Binding len26
Me-7.483
Phylopstem0.30799885714285713
Phylopflank0.004883115000000049
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure