Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCTGCAGCGCGC
.(((.(((((((((...((((&)))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267774
GeneSymbolIFT20
Binding site95,113
Score0.846
Seed0
Au0.324
Energy-20.7
Binding len18
Me-8.881
Phylopstem0.11633862222222222
Phylopflank0.14721518000000006
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure