Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCGTGGCAGGCT
..((.(((((((((((.....&)))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267775
GeneSymbolIFT20
Binding site29,45
Score0.846
Seed0
Au0.324
Energy-19.9
Binding len16
Me-9.076
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end3
Position5UTR
2D Structure