Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCTGCAGCGCGC
.(((.(((((((((...((((&)))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267778
GeneSymbolIFT20
Binding site95,113
Score0.923
Seed0
Au0.279
Energy-20.7
Binding len18
Me-8.881
Phylopstem0.20193705555555555
Phylopflank0.11419866749999996
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure