Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGCAGTTCATGCAGCTAGCAAG
(((((((((((..(((.((((&)))).))).....))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267798
GeneSymbolPTPRC
Binding site9,35
Score0.846
Seed1
Au0.531
Energy-20.9
Binding len26
Me-8.574
Phylopstem1.2618406916666667
Phylopflank2.766926603333334
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end7
Position5UTR
2D Structure