Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGCTGGCAGTTGCT
..((((((((....(((.(((&))).)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267798
GeneSymbolPTPRC
Binding site501,519
Score0.846
Seed1
Au0.471
Energy-19.3
Binding len18
Me-13.275
Phylopstem-0.18233074999999999
Phylopflank-0.1547993125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure