Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCAGCAGTCTGTAT
.((((((((((((((((....&))))))).)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267805
GeneSymbolPAAF1
Binding site2053,2072
Score0.846
Seed1
Au0.588
Energy-22.0
Binding len19
Me-3.793
Phylopstem-0.1818019388888889
Phylopflank0.27718410150000006
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end4
Position3UTR
2D Structure