Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGTAGCCGCAGCTGTC
..(((((((((((((...((.&))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267814
GeneSymbolSLC12A9
Binding site25,43
Score1.0
Seed1
Au0.294
Energy-25.1
Binding len18
Me-5.19
Phylopstem0.7673668923076923
Phylopflank0.31762959835526317
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure