Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCCGCCCTGGTTGCAC
.(((((((((((((.......&))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267818
GeneSymbolOSTC
Binding site118,135
Score0.846
Seed1
Au0.426
Energy-17.6
Binding len17
Me-4.762
Phylopstem5.0835343125
Phylopflank4.87615158375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure