Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCGCCAGCCCTCAGCTGCT
..(((((((.(((((......&.)))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267828
GeneSymbolZNF839
Binding site484,504
Score1.0
Seed1
Au0.353
Energy-19.5
Binding len16
Me-6.433
Phylopstem1.4031752857142856
Phylopflank0.41004242249999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure