Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCAGAATTGCTAGGTA
((((((((.....((((.....&))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001267843
GeneSymbolCLOCK
Binding site5358,5375
Score0.846
Seed1
Au0.603
Energy-15.4
Binding len17
Me-13.697
Phylopstem0.29041811249999994
Phylopflank0.6576742950000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure