Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGACTGCGGCGTCGAG
(((..(((((((((.(((((.&))))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001267864
GeneSymbolSLIRP
Binding site119,139
Score0.923
Seed0
Au0.515
Energy-20.0
Binding len20
Me-11.824
Phylopstem2.4428397988888886
Phylopflank1.2856667633750003
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure