Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGTGCAAGTATGCCAGTGTG
(((((((((((..((((.((..&)).)))).))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001269040
GeneSymbolCTCFL
Binding site1225,1246
Score0.846
Seed1
Au0.544
Energy-19.4
Binding len21
Me-8.574
Phylopstem-0.6221893416666667
Phylopflank-0.12611690999999997
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure