Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACGAATGCCACATCTGCC
..((((.((.(((((((((((&))))))))...))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001269040
GeneSymbolCTCFL
Binding site1377,1400
Score0.846
Seed0
Au0.397
Energy-20.4
Binding len23
Me-7.743
Phylopstem-0.16022471428571428
Phylopflank-0.19689464874999998
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end8
PositionCDS
2D Structure