Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCATGCTTACAGCGCTGCAGA
(((((((....((((((((..&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001269040
GeneSymbolCTCFL
Binding site1536,1560
Score0.846
Seed1
Au0.485
Energy-19.4
Binding len17
Me-11.375
Phylopstem-0.19968146250000002
Phylopflank-0.3207080599999999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure