Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCACGCGGTGCAC
.((((.(((((((((((....&)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001269046
GeneSymbolCTCFL
Binding site548,565
Score0.846
Seed0
Au0.265
Energy-19.9
Binding len17
Me-5.694
Phylopstem0.6172043333333334
Phylopflank-0.09238055125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure